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Publications

Publications

Mathematics

S.No. Authors Title Journal Vol, Issue, Page No. Year
Sk Md Atique Anwar, Pradyumna Pradhan, Pradip Sasmal and Ramunaidu RandhiSufficient Conditions for Convergence of RHT and RHTP Algorithms Based on RIC of Order 2sIEEE Signal Processing Lettersvol. 33, pp. 246-2502026
Shipra Mahata, Rathan SamalaExplicit Runge-Kutta Methods with Multiquadric and Inverse Multiquadric Radial Function FunctionsInternational Journal of Computational MethodsVol. 23, No. 042026
Lavanya V Salian, Rathan Samala, Debojyoti GhoshCentral compact finite-difference scheme with high spectral resolution for KdV equationNumerical Methods for Partial Differential Equations42, no. 1 : e700602026
Pradyumna Pradhan, Shubham Kumar Jain, Pradip Sasmal, and Ramu Naidu RandhiDeterministic Construction of Unimodular Tight Frames Consisting Orthogonal Blocks via Block Preserving OperatorsSignal Processing (Elsevier)230, 1098212025
Srinivas Tenneti, P. D. Divya, E. S. S. Tejaswini, Ramunaidu Randhi and Seshagiri Rao AmbatiA Comprehensive analysis of oxygen transfer dynamics in wastewater treatment plantsJournal of Water Process Engineering72, 1076372025
Pradyumna Pradhan, Sk Md Atique Anwar, Ramunaidu Randhi and Pradip SasmalNon-negative sparse signal recovery using the integration of ReLU and hard thresholding pursuit operatorsSignal Processing (Elsevier)Vol. 236, 1100322025
Pagoti Reshma, Srinivas Tenneti, Pradip Sasmal and Ramunaidu RandhiLearned-MAP-OMP: An Unrolled Neural Network for Signal DenoisingJournal of Visual Communication and Image RepresentationVol. 112, 1045922025
Pradyumna Pradhan, Shubham Kumar Jain, Pradip Sasmal, and Ramunaidu RandhiNon-iterative Sparse Signal Recovery Algorithms for Sparse Matrices and their GuaranteesJournal of the Franklin InstituteVol. 362, Issue 15, 1081302025
Yhonatan Kvich, Reshma Pagoti, Pradyumna Pradhan, Ramunaidu Randhi and Yonina C. EldarDeep Unfolding of Tail-Based Methods for Robust Sparse Recovery Under Noise and Model MismatchIEEE Transactions on Neural Networks & Learning Systems2025
Shipra Mahata, Samala Rathan, Juan Ruiz Alverez, Dionisio F. YanezA general correction for numerical integration rules over piece-wise continuous functionsJournal of Computational and Applied MathematicsVol. 459, 1163782025
Arun Govind Neelan, Raimund Burger, Manoj T Nair, Samala RathanHigher-order conservative discretizations on arbitrarily varying non-uniform gridsComputational and Applied Mathematics44, Article No. 272025
Lavanya V Salian, Rathan Samala, Rakesh KumarCompact finite difference scheme for some Sobolev-type equations with Dirichlet boundary conditionsJournal of Computational MathematicsDOI: 10.4208/jcm.2509-m2024-02962025
J. Chaudhary, H. Gahlawat, M. Wlodarczyk, M. ZehaviKernels for the Disjoint Paths Problem on Subclasses of Chordal GraphsJournal of Computer and System Sciencesvol156, 1037152025
B. S. Shaik, Pradyumna Pradhan, W. Pu, R. Ramu Naidu, Miguel R. D. Rodrigues, and Yonina C. EldarOptimization guarantees of unfolded ISTA and ADMM networks with smooth soft thresholdingIEEE Transactions on Signal Processingvol. 72, pp. 3272-32862024
Lavanya V Salian, Samala RathanExponential approximation space reconstruction weighted essentially nonoscillatory scheme for dispersive partial differential equationsMathematical Methods in the Applied SciencesVol. 47(4), 1823-18512024
Samala Rathan, Deepit Shah, T. Hemanth Kumar, K. Sandeep CharanAdaptive IQ and IMQ-RBFs for solving initial value problems: Adam-Bashforth and Adam-Moulton methodsInternational Journal of Computational MethodsVol. 21 (3), 2350032, 20242024
Jan Friedrich, Sanjibanee Sudha, Samala RathanNumerical schemes for a class of nonlocal conservation laws: a general approachNetworks and Heterogenous Media18(3), 1335-13542023
Samala Rathan, Jiaxi GuA sixth-order central WENO scheme for nonlinear degenerate parabolic equationsComputational and Applied Mathematics42, Article No. 1822023
Samala Rathan, Deepit ShahConstruction and Comparative Study of Second Order Time Stepping Methods Based on IQ and IMQ-RBFsInternational Journal of Applied and Computational MathematicsVol. 8, Issue 2032022
Samala Rathan, Biswarup BiswasArc length based WENO scheme for Hamilton-Jacobi equationsCommunications on Applied Mathematics and ComputationVol, 3, 481-4962021
R. Ramu Naidu and Chandra R. MurthyConstruction of unimodular tight frames using majorization-minimization for compressed sensingSignal Processing (Elsevier)vol. 172, pp. 1075162020
Samala Rathan, Rakesh Kumar, Ameya D. JagtapL1-type smoothness indicators based WENO scheme for nonlinear degenerate parabolic equationsApplied Mathematics and ComputationVol.375, 1251122020
Samala Rathan, Naga Raju Gande, Ashlesha A. BhiseSimple smoothness indicator WENO-Z scheme for hyperbolic conservation lawsApplied Numerical MathematicsVol 157, 255-2752020
Samala RathanL1-type smoothness indicators based weighted essentially nonoscillatory scheme for Hamilton-Jacobi equationsInternational Journal for Numerical Methods in FluidsVol, 92(12), 1927-19472020
R. Ramu Naidu, M. Srinivas, and C. S. SastryComplaint ternary matrices based on Restricted isometry property: Construction and application to image retrievalJ. of Combinatorics, Information & System Sciencesvol. 44, pp. 289-2982019

Biology

S.No. Authors Title Journal Vol, Issue, Page No. Year
Grewal, S., Ghosh, B., Narayan, U., & Aparoy, PComputational strategies for unraveling insights from known inhibitors for further lead optimization: A case study on Celecoxib analoguesScientific Reports16(1), 67202026
Gumma, J., Aparoy, P., Tanneru, H. K., & Palla, S.Rational design of metal organic frameworks for cancer therapy: Synthesis, in silico modelling and biocompatibility insights.Journal of Drug Delivery Science and Technology119, 1081262026
Jitesh et alAnalysis of infection-associated gene expression and their interaction with differentially expressed miRNA from the prospective of polymicrobial infections in corneal keratitis: Infection-Associated Gene and miRNA Interactions in Polymicrobial Corneal KeratitisIndian Journal of Biochemistry and Biophysics63 (4), 469–4822026
Grewal, S., Ghosh, B., Stehling, S., Borchert, A., Aparoy, P., & Kuhn, H.Structural Insights into the Interaction of Human ALOX15 with the Natural Antioxidant Nordihydroguaiaretic Acid: Functional Inhibitor Studies and Molecular Dynamics SimulationsAntioxidants15(3), 3552026
Singh, D., Kushwaha, T., Kulandaisamy, R., Kumar, V., Baswal, K., Tiwari, S. H., Ghorai, A., Kumar, M., Kumar, S., De, S., Polamarasetty, A., Sehgal, D., Katika, M. R., Gadde, S., Côté, M., Kayampeta, S. R., Appaiahgari, M. B., & Inampudi, K. K.Redefining NSP12 activity in SARS-CoV-2 and its regulation by NSP8 and NSP7Molecular Therapy — Nucleic Acids36(1), 1024522025
Bajaj, M., Kumar, R., Pandey, V., Parvez, S., Tanneru, H. K., Aparoy, P., & Karnati, R.Integrative machine learning-guided in silico and in vitro approach reveals selective small molecule inhibitors targeting mutant IDH1RSC Advances15(59), 50944–509622025
R Kulandaisamy et al.In Silico Screening and Molecular Dynamics Simulations of Small Molecules Targeting Peptidyl tRNA Hydrolase for Drug-Resistant TuberculosisACS Omega10 (33), 37115-371272025
Parvez, S., Grewal, S., Kumari, A., & Aparoy, P.Computational insights into the targeted inhibition of lipoxygenase in Pseudomonas aeruginosa: hints for drug designArchives of Microbiology207(4), 752025
Parvez, S., Bhavani, K. S., Gupta, C. C., Werz, O., & Aparoy, P.Molecular dynamics simulations to decipher the hotspots at the allosteric site of human 5-lipoxygenaseJournal of Molecular Graphics and Modelling136, 1089402025
Chen, X., Parvez, S., Wiegand, H. F., Wu, L., Stehling, S., Borchert, A., Yang, J., Aparoy, P., & Kuhn, H.Arachidonoyl-carnitine and arachidonoyl-coenzyme A are suitable substrates for mammalian ALOX isoformsJournal of Lipid Research66(8), 1008612025
Roigas, S., Kakularam, K. R., Rothe, M., Heydeck, D., Aparoy, P., & Kuhn, H.Bony Fish Arachidonic Acid 15-Lipoxygenases Exhibit Different Catalytic Properties than Their Mammalian Orthologs, Suggesting Functional Enzyme Evolution during Vertebrate DevelopmentInternational Journal of Molecular Sciences24(18), 141542023
Kulandaisamy et alRepurposing of FDA Approved Drugs Against SARS-CoV-2 Papain-Like Protease: Computational, Biochemical, and in vitro StudiesFrontiers in Microbiology13, 8778132022
Kumar Reddy Kakularam, Felix Karst, Aparoy Polamarasetty, Igor Ivanov, Dagmar Heydeck, Hartmut KuhnParalog- and ortholog-specificity of inhibitors of human and mouse lipoxygenase-isoformsBiomedicine & Pharmacotherapy145, 1124342022
Ivanov I, Kakularam KR, Shmendel EV, Rothe M, Aparoy P, Heydeck D, Kuhn HOxygenation of endocannabinoids by mammalian lipoxygenase isoformsBiochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids1866 (6), 1589182021
Chaudhary N, Aparoy P.Application of per-residue energy decomposition to identify the set of amino acids critical for in silico prediction of COX-2 inhibitory activityHeliyon.6 (10) e04944;2020

Chemistry

Chemistry

S.No.
S.No. Authors Title Journal Vol, Issue, Page No. Year
Vipul Kumar Ambasta, Somnath Ghosh, Anik SenExploring the electronic properties of doped zirconia for enhanced optoelectronic applications: A quantum chemical approachJ Phys Chem Solids197, 1124122025
Gouri Sankar Das, Komal Kumari, Phulladweepa Patra, P Swaminathan, Somnath GhoshZinc metal free polymer-based anode materials for ultralong aqueous zinc-ion rechargeable batteryElectrochimica Acta527, 1462112025
Phulladweepa Patra, Somnath Ghosh and Sourav LahaExploring Synergy: Pd/HyMn0.8Co0.2O2 Nanocomposite for enhanced Overall Water Splitting towards Sustainable Green Hydrogen ProductionEnergy & Fuels39, 119262025
S. Parvez, K. S. Bhavani, Ch. G. Chandaluri, O. Werz and P. AparoyMolecular dynamics simulations to decipher the hotspots at the allosteric site of human 5-lipoxygenaseJ. Mol. Graph. Model.136, 1089402025
R. S. Jat, S. Kar, B. Prabagar, K. Yadav, Ch. G. Chandaluri and M. BhanuchandraSynthesis of Highly Substituted Cyclobutanes via Silver-Catalyzed Reaction of Pyrazole and Propargyl CarbonatesAsian J. Org. Chem.14, e2025003742025
Raghavendra Maddirala, Himangshu Kakati, Rohit Shukla, Rajat Jain, Somnath Ghosh, Deepak Amban Mishra, Ranjan Pramanik, Aditya Dhanraj, Premananda Dey, A.K. Dubey, Archana SharmaInvestigating the impact of pulsed plasma-based shockwave technology on the characteristics of Indian crude oilGeoenergy Science and Engineering233, 2125312024
Phulladweepa Patra, Sourav Laha, and Somnath GhoshExfoliated Cobalt-Doped Manganese Oxide Nanosheets: An Efficient and Stable Electrocatalyst for Hydrogen Evolution Reaction in an Alkaline MediumACS Appl. Energy Mater.7, 3577−35892024
Gouri Sankar Das, Rajarshi Panigrahi, Somnath Ghosh, Kumud Malika TripathiWaste frying oil derived carbon nano-onions as a cost-effective cathode material for high-voltage zinc-ion hybrid supercapacitorsMaterials Today Sustainability25, 100656-1006632024
Aarcha Shanmugha Mary, Abishek Mani, Somnath Ghosh, Kaushik RajaramPhage embedded gelatin, alginate and gelatin/alginate-starch based hydrogels for topical bactericidal applications against multi-drug resistant Pseudomonas aeruginosaJ. Indian Chem. Soc.101, 101272-1012802024
Archa Shanmugha Mary et al.Formulation of Dual-Functional Nonionic Cetomacrogol Creams Incorporated with Bacteriophage and Human Platelet Lysate for Effective Targeting of MDR P. aeruginosa and Enhanced Wound HealingACS Appl. Bio Mater.7, 65832024
Nisha Dhiman, Vivek Sharma, Somnath GhoshPerspective on Biomass-Based Cotton-Derived Nanocarbon for Multifunctional Energy Storage and Harvesting ApplicationsACS Appl. Electron. Mater.5, 1970-19912023
Maidhily Manikandan, Ch. G. Chandaluri, Hideki Abe, Gubbala V. RameshNanoarchitectonics of cathode electrocatalyst based on CoMn2O4 and graphene nanocomposite for fuel cell applicationsApplied Nanoscience13, 6489-65022023
N Dhiman, Somnath Ghosh, YK Mishra, KM TripathiProspects of Nano-carbons as Emerging Catalyst for the Enzyme-Mimetic ApplicationsMaterials Advances3, 3101-31222022
R. S. Maurya, S. Jayanthi, Ch. G. Chandaluri, and T. P. RadhakrishnanMonitoring Molecular Microparticles through the Amorphous-to-Crystalline Transformation and Fluorescence Enhancement/TuningChem. Mater.34, 244−2532022
T R K Dora, Somnath Ghosh, R DamodarSynthesis and evaluation of physical properties of Agar bio-polymer film coating - an alternative for food packaging industryMaterials Research Express7 (9), 0953072020
S I Basha, Somnath Ghosh, K Vinothkumar, B Ramesh, K V M Mohan, E SukumarFumaric acid incorporated Ag/agar-agar hybrid hydrogel: a multifunctional avenue to tackle wound healingMaterials Science and Engineering: C111, 1107432020
B K Goriparthi, P N E Naveen, H R Shankar, Somnath GhoshMechanical, wear and fatigue behavior of functionalized CNTs reinforced POM/PTFE compositesMaterials Research Express6 (6), 0650512019
S I Basha, Somnath Ghosh, K V Kumar, B Ramesh, P Kumari, H Prakash, E. SukumarSynthesis, characterization and antibacterial activity of fumaric acid incorporated silver nanoparticle hydrogelJ. Indian Chem. Soc.96 (11), 14092019
B K Goriparthi, P N E Naveen, H R Sankar, Somnath GhoshEffect of functionalization and concentration of carbon nanotubes on mechanical, wear and fatigue behaviours of polyoxymethylene/carbon nanotube nanocompositesBulletin of Materials Science42 (3), 982019